Similarity Estimation Between DNA Sequences Based on Local Pattern Histograms of Binary Images

Graphical representation of DNA sequences is one of the most popular techniques for alignment-free sequence comparison. Here, we propose a new method for the feature extraction of DNA sequences represented by binary images, by estimating the similarity between DNA sequences using the frequency histo...

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Bibliographic Details
Main Authors: Yusei Kobori, Satoshi Mizuta
Format: Article
Language:English
Published: Elsevier 2016-04-01
Series:Genomics, Proteomics & Bioinformatics
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1672022916300353