Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments

Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments

Abstract Background Taxonomic profiling is a fundamental task in microbiome research that aims to detect and quantify the relative abundance of microorganisms in biological samples. Available methods using shotgun metagenomic data generally depend on the deposition of sequenced and taxonomically ann...

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Bibliographic Details
Main Authors: Hans-Joachim Ruscheweyh, Alessio Milanese, Lucas Paoli, Nicolai Karcher, Quentin Clayssen, Marisa Isabell Keller, Jakob Wirbel, Peer Bork, Daniel R. Mende, Georg Zeller, Shinichi Sunagawa
Format: Article
Language:English
Published: BMC 2022-12-01
Series:Microbiome
Subjects:
Metagenomics
Microbial community
Benchmarking
Taxonomic profiling
Marker gene
Metagenome-assembled genome
Online Access:https://doi.org/10.1186/s40168-022-01410-z

Internet

https://doi.org/10.1186/s40168-022-01410-z

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