Genome-Enabled Molecular Subtyping and Serotyping for Shiga Toxin-Producing Escherichia coli

Genome-Enabled Molecular Subtyping and Serotyping for Shiga Toxin-Producing Escherichia coli

Foodborne pathogens are a major public health burden in the United States, leading to 9.4 million illnesses annually. Since 1996, a national laboratory-based surveillance program, PulseNet, has used molecular subtyping and serotyping methods with the aim to reduce the burden of foodborne illness thr...

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Bibliographic Details
Main Authors: Sung B. Im, Sonali Gupta, Mani Jain, Aroon T. Chande, Heather A. Carleton, I. King Jordan, Lavanya Rishishwar
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-10-01
Series:Frontiers in Sustainable Food Systems
Subjects:
foodborne surveillance
PulseNet
machine learning
random forest
pulsed-field gel electrophoresis (PFGE)
Online Access:https://www.frontiersin.org/articles/10.3389/fsufs.2021.752873/full

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https://www.frontiersin.org/articles/10.3389/fsufs.2021.752873/full

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