Effectiveness of the PSI BLAST algorithm in dependence on scanning word size
The alignment searching algorithms for biomolecular sequences PSI-BLAST are reviewed in the article. We asses the feasibility to modify NCBI (National Center for Biotechnology Information) PSI-BLAST implementation. We modify the implementation of the iterative algorithm by increasing scanning word...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
| Published: |
Vilnius University Press
2003-12-01
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| Series: | Lietuvos Matematikos Rinkinys |
| Online Access: | https://www.journals.vu.lt/LMR/article/view/32524 |