dStruct: identifying differentially reactive regions from RNA structurome profiling data

dStruct: identifying differentially reactive regions from RNA structurome profiling data

Abstract RNA biology is revolutionized by recent developments of diverse high-throughput technologies for transcriptome-wide profiling of molecular RNA structures. RNA structurome profiling data can be used to identify differentially structured regions between groups of samples. Existing methods are...

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Bibliographic Details
Main Authors: Krishna Choudhary, Yu-Hsuan Lai, Elizabeth J. Tran, Sharon Aviran
Format: Article
Language:English
Published: BMC 2019-02-01
Series:Genome Biology
Subjects:
RNA structure
Structure probing
Differential analysis
Transcriptome-wide profiling
SHAPE
DMS
Online Access:http://link.springer.com/article/10.1186/s13059-019-1641-3

Internet

http://link.springer.com/article/10.1186/s13059-019-1641-3

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