HandyCNV: Standardized Summary, Annotation, Comparison, and Visualization of Copy Number Variant, Copy Number Variation Region, and Runs of Homozygosity

HandyCNV: Standardized Summary, Annotation, Comparison, and Visualization of Copy Number Variant, Copy Number Variation Region, and Runs of Homozygosity

Detection of CNVs (copy number variants) and ROH (runs of homozygosity) from SNP (single nucleotide polymorphism) genotyping data is often required in genomic studies. The post-analysis of CNV and ROH generally involves many steps, potentially across multiple computing platforms, which requires the...

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Bibliographic Details
Main Authors: Jinghang Zhou, Liyuan Liu, Thomas J. Lopdell, Dorian J. Garrick, Yuangang Shi
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-09-01
Series:Frontiers in Genetics
Subjects:
copy number variant
run of homozygosity
haplotype
SNP
CNVR
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2021.731355/full

Internet

https://www.frontiersin.org/articles/10.3389/fgene.2021.731355/full

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