Protocol for CAROM: A machine learning tool to predict post-translational regulation from metabolic signatures

Summary: This protocol describes CAROM, a computational tool that combines genome-scale metabolic networks (GEMs) and machine learning to identify enzyme targets of post-translational modifications (PTMs). Condition-specific enzyme and reaction properties are used to predict targets of phosphorylati...

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Bibliographic Details
Main Authors: Kirk Smith, Nicole Rhoads, Sriram Chandrasekaran
Format: Article
Language:English
Published: Elsevier 2022-12-01
Series:STAR Protocols
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166722006797