Incorporating motif analysis into gene co-expression networks reveals novel modular expression pattern and new signaling pathways.

Understanding of gene regulatory networks requires discovery of expression modules within gene co-expression networks and identification of promoter motifs and corresponding transcription factors that regulate their expression. A commonly used method for this purpose is a top-down approach based on...

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Bibliographic Details
Main Authors: Shisong Ma, Smit Shah, Hans J Bohnert, Michael Snyder, Savithramma P Dinesh-Kumar
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS Genetics
Online Access:http://europepmc.org/articles/PMC3789834?pdf=render