ATTfold: RNA Secondary Structure Prediction With Pseudoknots Based on Attention Mechanism

ATTfold: RNA Secondary Structure Prediction With Pseudoknots Based on Attention Mechanism

Accurate RNA secondary structure information is the cornerstone of gene function research and RNA tertiary structure prediction. However, most traditional RNA secondary structure prediction algorithms are based on the dynamic programming (DP) algorithm, according to the minimum free energy theory, w...

Full description

Bibliographic Details
Main Authors: Yili Wang, Yuanning Liu, Shuo Wang, Zhen Liu, Yubing Gao, Hao Zhang, Liyan Dong
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-12-01
Series:Frontiers in Genetics
Subjects:
RNA
secondary structure prediction
pseudoknot
attention mechanism
deep learning
hard constraints
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2020.612086/full

Internet

https://www.frontiersin.org/articles/10.3389/fgene.2020.612086/full

Similar Items