DropletQC: improved identification of empty droplets and damaged cells in single-cell RNA-seq data

Abstract Background Advances in droplet-based single-cell RNA-sequencing (scRNA-seq) have dramatically increased throughput, allowing tens of thousands of cells to be routinely sequenced in a single experiment. In addition to cells, droplets capture cell-free “ambient” RNA predominantly caused by ly...

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Bibliographic Details
Main Authors: Walter Muskovic, Joseph E. Powell
Format: Article
Language:English
Published: BMC 2021-12-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-021-02547-0