Optimized RNA structure alignment algorithm based on longest arc-preserving common subsequence

Optimized RNA structure alignment algorithm based on longest arc-preserving common subsequence

Ribonucleic acid (RNA) structure alignment is an important problem in computational biology to identify structural similarity of RNAs. Obtaining an efficient method for this problem is challenging due to the high computational time for the optimal solution and the low accuracy of a heuristic solutio...

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Bibliographic Details
Main Authors: Hazem M. Bahig, Mohamed A.G. Hazber, Tarek G. Kenawy
Format: Article
Language:English
Published: AIMS Press 2024-03-01
Series:AIMS Mathematics
Subjects:
optimization
rna alignment
longest common subsequence
parallel algorithm
multicore system
Online Access:https://www.aimspress.com/article/doi/10.3934/math.2024550?viewType=HTML

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https://www.aimspress.com/article/doi/10.3934/math.2024550?viewType=HTML

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