THAPBI PICT—a fast, cautious, and accurate metabarcoding analysis pipeline

THAPBI PICT is an open source software pipeline for metabarcoding analysis of Illumina paired-end reads, including cases of multiplexing where more than one amplicon is amplified per DNA sample. Initially a Phytophthora ITS1 Classification Tool (PICT), we demonstrate using worked examples with our o...

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Bibliographic Details
Main Authors: Peter J. A. Cock, David E. L. Cooke, Peter Thorpe, Leighton Pritchard
Format: Article
Language:English
Published: PeerJ Inc. 2023-08-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/15648.pdf