Flexible experimental designs for valid single-cell RNA-sequencing experiments allowing batch effects correction

It is not clear which designs, other than completely randomized ones, are valid for scRNA-seq experiments so that batch effects can be adjusted. Here the authors show that under flexible reference panel and chain-type designs, biological variability can also be separated from batch effects, at least...

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Bibliographic Details
Main Authors: Fangda Song, Ga Ming Angus Chan, Yingying Wei
Format: Article
Language:English
Published: Nature Portfolio 2020-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-020-16905-2