SparkEC: speeding up alignment-based DNA error correction tools

Abstract Background In recent years, huge improvements have been made in the context of sequencing genomic data under what is called Next Generation Sequencing (NGS). However, the DNA reads generated by current NGS platforms are not free of errors, which can affect the quality of downstream analysis...

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Bibliographic Details
Main Authors: Roberto R. Expósito, Marco Martínez-Sánchez, Juan Touriño
Format: Article
Language:English
Published: BMC 2022-11-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-022-05013-1