Telescope: Characterization of the retrotranscriptome by accurate estimation of transposable element expression.

Telescope: Characterization of the retrotranscriptome by accurate estimation of transposable element expression.

Characterization of Human Endogenous Retrovirus (HERV) expression within the transcriptomic landscape using RNA-seq is complicated by uncertainty in fragment assignment because of sequence similarity. We present Telescope, a computational software tool that provides accurate estimation of transposab...

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Bibliographic Details
Main Authors: Matthew L Bendall, Miguel de Mulder, Luis Pedro Iñiguez, Aarón Lecanda-Sánchez, Marcos Pérez-Losada, Mario A Ostrowski, R Brad Jones, Lubbertus C F Mulder, Gustavo Reyes-Terán, Keith A Crandall, Christopher E Ormsby, Douglas F Nixon
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-09-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1006453

Internet

https://doi.org/10.1371/journal.pcbi.1006453

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