Identification of sample mix-ups and mixtures in microbiome data in Diversity Outbred mice

AbstractIn a Diversity Outbred mouse project with genotype data on 500 mice, including 297 with microbiome data, we identified three sets of sample mix-ups (two pairs and one trio) as well as at least 15 microbiome samples that appear to be mixtures of pairs of mice. The microbiome data consisted of...

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Bibliographic Details
Main Authors: Alexandra K Lobo, Lindsay L Traeger, Mark P Keller, Alan D Attie, Federico E Rey, Karl W Broman
Format: Article
Language:English
Published: Oxford University Press 2021-09-01
Series:G3: Genes, Genomes, Genetics
Online Access:https://academic.oup.com/g3journal/article-lookup/doi/10.1093/g3journal/jkab308