The effect of orthology and coregulation on detecting regulatory motifs.

BACKGROUND: Computational de novo discovery of transcription factor binding sites is still a challenging problem. The growing number of sequenced genomes allows integrating orthology evidence with coregulation information when searching for motifs. Moreover, the more advanced motif detection algorit...

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Bibliographic Details
Main Authors: Valerie Storms, Marleen Claeys, Aminael Sanchez, Bart De Moor, Annemieke Verstuyf, Kathleen Marchal
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2010-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC2815771?pdf=render