Impact of Aligner, Normalization Method, and Sequencing Depth on TempO-seq Accuracy

High-throughput transcriptomics has advanced through the introduction of TempO-seq, a targeted alternative to traditional RNA-seq. TempO-seq platforms use 50 nucleotide probes, each specifically designed to target a known transcript, thus allowing for reduced sequencing depth per sample compared wit...

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Bibliographic Details
Main Authors: Logan J Everett, Deepak Mav, Dhiral P Phadke, Michele R Balik-Meisner, Ruchir R Shah
Format: Article
Language:English
Published: SAGE Publishing 2022-04-01
Series:Bioinformatics and Biology Insights
Online Access:https://doi.org/10.1177/11779322221095216