HArmonized single-cell RNA-seq Cell type Assisted Deconvolution (HASCAD)

HArmonized single-cell RNA-seq Cell type Assisted Deconvolution (HASCAD)

Abstract Background Cell composition deconvolution (CCD) is a type of bioinformatic task to estimate the cell fractions from bulk gene expression profiles, such as RNA-seq. Many CCD models were developed to perform linear regression analysis using reference gene expression signatures of distinct cel...

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Bibliographic Details
Main Authors:	Yen-Jung Chiu, Chung-En Ni, Yen-Hua Huang
Format:	Article
Language:	English
Published:	BMC 2023-10-01
Series:	BMC Medical Genomics
Subjects:	Harmonization Cell composition deconvolution RNA-seq Deep learning
Online Access:	https://doi.org/10.1186/s12920-023-01674-w

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