FEAST: A flow cytometry-based toolkit for interrogating microglial engulfment of synaptic and myelin proteins

Abstract Although engulfment is a hallmark of microglia function, fully validated platforms that facilitate high-throughput quantification of this process are lacking. Here, we present FEAST (Flow cytometric Engulfment Assay for Specific Target proteins), which enables interrogation of in vivo engul...

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Main Authors: Lasse Dissing-Olesen, Alec J. Walker, Qian Feng, Helena J. Barr, Alicia C. Walker, Lili Xie, Daniel K. Wilton, Indrani Das, Larry I. Benowitz, Beth Stevens
Format: Article
Language:English
Published: Nature Portfolio 2023-09-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-41448-7
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author Lasse Dissing-Olesen
Alec J. Walker
Qian Feng
Helena J. Barr
Alicia C. Walker
Lili Xie
Daniel K. Wilton
Indrani Das
Larry I. Benowitz
Beth Stevens
author_facet Lasse Dissing-Olesen
Alec J. Walker
Qian Feng
Helena J. Barr
Alicia C. Walker
Lili Xie
Daniel K. Wilton
Indrani Das
Larry I. Benowitz
Beth Stevens
author_sort Lasse Dissing-Olesen
collection DOAJ
description Abstract Although engulfment is a hallmark of microglia function, fully validated platforms that facilitate high-throughput quantification of this process are lacking. Here, we present FEAST (Flow cytometric Engulfment Assay for Specific Target proteins), which enables interrogation of in vivo engulfment of synaptic material by brain resident macrophages at single-cell resolution. We optimize FEAST for two different analyses: quantification of fluorescent material inside live cells and of engulfed endogenous proteins within fixed cells. To overcome false-positive engulfment signals, we introduce an approach suitable for interrogating engulfment in microglia from perfusion-fixed tissue. As a proof-of-concept for the specificity and versatility of FEAST, we examine the engulfment of synaptic proteins after optic nerve crush and of myelin in two mouse models of demyelination (treatment with cuprizone and injections of lysolecithin). We find that microglia, but not brain-border associated macrophages, engulf in these contexts. Our work underscores how FEAST can be utilized to gain critical insight into functional neuro-immune interactions that shape development, homeostasis, and disease.
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spelling doaj.art-8e693c8aa0b84be6a2269dca6bec61292023-11-20T10:12:16ZengNature PortfolioNature Communications2041-17232023-09-0114111510.1038/s41467-023-41448-7FEAST: A flow cytometry-based toolkit for interrogating microglial engulfment of synaptic and myelin proteinsLasse Dissing-Olesen0Alec J. Walker1Qian Feng2Helena J. Barr3Alicia C. Walker4Lili Xie5Daniel K. Wilton6Indrani Das7Larry I. Benowitz8Beth Stevens9Department of Neurology, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurology, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurosurgery, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurology, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurology, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurosurgery, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurology, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurology, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurosurgery, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterDepartment of Neurology, Boston Children’s Hospital, F.M. Kirby Neurobiology CenterAbstract Although engulfment is a hallmark of microglia function, fully validated platforms that facilitate high-throughput quantification of this process are lacking. Here, we present FEAST (Flow cytometric Engulfment Assay for Specific Target proteins), which enables interrogation of in vivo engulfment of synaptic material by brain resident macrophages at single-cell resolution. We optimize FEAST for two different analyses: quantification of fluorescent material inside live cells and of engulfed endogenous proteins within fixed cells. To overcome false-positive engulfment signals, we introduce an approach suitable for interrogating engulfment in microglia from perfusion-fixed tissue. As a proof-of-concept for the specificity and versatility of FEAST, we examine the engulfment of synaptic proteins after optic nerve crush and of myelin in two mouse models of demyelination (treatment with cuprizone and injections of lysolecithin). We find that microglia, but not brain-border associated macrophages, engulf in these contexts. Our work underscores how FEAST can be utilized to gain critical insight into functional neuro-immune interactions that shape development, homeostasis, and disease.https://doi.org/10.1038/s41467-023-41448-7
spellingShingle Lasse Dissing-Olesen
Alec J. Walker
Qian Feng
Helena J. Barr
Alicia C. Walker
Lili Xie
Daniel K. Wilton
Indrani Das
Larry I. Benowitz
Beth Stevens
FEAST: A flow cytometry-based toolkit for interrogating microglial engulfment of synaptic and myelin proteins
Nature Communications
title FEAST: A flow cytometry-based toolkit for interrogating microglial engulfment of synaptic and myelin proteins
title_full FEAST: A flow cytometry-based toolkit for interrogating microglial engulfment of synaptic and myelin proteins
title_fullStr FEAST: A flow cytometry-based toolkit for interrogating microglial engulfment of synaptic and myelin proteins
title_full_unstemmed FEAST: A flow cytometry-based toolkit for interrogating microglial engulfment of synaptic and myelin proteins
title_short FEAST: A flow cytometry-based toolkit for interrogating microglial engulfment of synaptic and myelin proteins
title_sort feast a flow cytometry based toolkit for interrogating microglial engulfment of synaptic and myelin proteins
url https://doi.org/10.1038/s41467-023-41448-7
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