MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data
Abstract Calling fusion genes from RNA-seq data is well established, but other transcriptional variants are difficult to detect using existing approaches. To identify all types of variants in transcriptomes we developed MINTIE, an integrated pipeline for RNA-seq data. We take a reference-free approa...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
BMC
2021-10-01
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| Series: | Genome Biology |
| Online Access: | https://doi.org/10.1186/s13059-021-02507-8 |