Antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from Nigeria

Abstract Introduction Probiotic lactobacilli are generally recognized as safe (GRAS) and are being used in several food and pharma formulations. However, growing concern of antibiotic resistance in bacterial strains of food origin and its possible transmission via functional foods is increasingly be...

Full description

Bibliographic Details
Main Authors: Rachael T. Duche, Anamika Singh, Arundhati Ganesh Wandhare, Vikas Sangwan, Manvesh Kumar Sihag, Tochukwu N. T. Nwagu, Harsh Panwar, Lewis. I. Ezeogu
Format: Article
Language:English
Published: BMC 2023-05-01
Series:BMC Microbiology
Subjects:
Online Access:https://doi.org/10.1186/s12866-023-02883-0
_version_ 1797822955651072000
author Rachael T. Duche
Anamika Singh
Arundhati Ganesh Wandhare
Vikas Sangwan
Manvesh Kumar Sihag
Tochukwu N. T. Nwagu
Harsh Panwar
Lewis. I. Ezeogu
author_facet Rachael T. Duche
Anamika Singh
Arundhati Ganesh Wandhare
Vikas Sangwan
Manvesh Kumar Sihag
Tochukwu N. T. Nwagu
Harsh Panwar
Lewis. I. Ezeogu
author_sort Rachael T. Duche
collection DOAJ
description Abstract Introduction Probiotic lactobacilli are generally recognized as safe (GRAS) and are being used in several food and pharma formulations. However, growing concern of antibiotic resistance in bacterial strains of food origin and its possible transmission via functional foods is increasingly being emphasized. Objectives This study screened potential probiotic lactic acid bacteria (LAB) strains for their phenotypic and genotypic antibiotic resistance profiles. Methods Susceptibility to different antibiotics was assayed by the Kirby Bauer standard disc diffusion protocol. Both conventional and SYBR-RTq-PCR were used for detection of resistance coding genes. Results A variable susceptibility pattern was documented against different antibiotic classes. LAB strains irrespective of origin displayed marked phenotypic resistance against cephalosporins, aminoglycosides, quinolones, glycopeptides; and methicillin among beta-lactams with few exceptions. In contrast, high sensitivity was recorded against macrolides, sulphonamides and carbapenems sub-group of beta-lactams with some variations. parC, associated with ciprofloxacin resistance was detected in 76.5% of the strains. Other prevalent resistant determinants observed were aac(6?)Ii (42.1%), ermB, ermC (29.4%), and tetM (20.5%). Six (?17.6%) of the isolates were free from genetic resistance determinants screened in this study. Conclusion Study revealed presence of antibiotic resistance determinants among lactobacilli from both fermented foods and human sources.
first_indexed 2024-03-13T10:16:55Z
format Article
id doaj.art-90c5f306b9294cd28786efb619e08259
institution Directory Open Access Journal
issn 1471-2180
language English
last_indexed 2024-03-13T10:16:55Z
publishDate 2023-05-01
publisher BMC
record_format Article
series BMC Microbiology
spelling doaj.art-90c5f306b9294cd28786efb619e082592023-05-21T11:10:15ZengBMCBMC Microbiology1471-21802023-05-0123111810.1186/s12866-023-02883-0Antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from NigeriaRachael T. Duche0Anamika Singh1Arundhati Ganesh Wandhare2Vikas Sangwan3Manvesh Kumar Sihag4Tochukwu N. T. Nwagu5Harsh Panwar6Lewis. I. Ezeogu7Department of Dairy Microbiology, Guru Angad Dev Veterinary and Animal Sciences UniversityDepartment of Dairy Microbiology, Guru Angad Dev Veterinary and Animal Sciences UniversityDepartment of Dairy Microbiology, Guru Angad Dev Veterinary and Animal Sciences UniversityDepartment of Dairy Microbiology, Guru Angad Dev Veterinary and Animal Sciences UniversityDepartment of Dairy Chemistry, Guru Angad Dev Veterinary and Animal Sciences UniversityDepartment of Microbiology, University of Nigeria NsukkaDepartment of Dairy Microbiology, Guru Angad Dev Veterinary and Animal Sciences UniversityDepartment of Microbiology, University of Nigeria NsukkaAbstract Introduction Probiotic lactobacilli are generally recognized as safe (GRAS) and are being used in several food and pharma formulations. However, growing concern of antibiotic resistance in bacterial strains of food origin and its possible transmission via functional foods is increasingly being emphasized. Objectives This study screened potential probiotic lactic acid bacteria (LAB) strains for their phenotypic and genotypic antibiotic resistance profiles. Methods Susceptibility to different antibiotics was assayed by the Kirby Bauer standard disc diffusion protocol. Both conventional and SYBR-RTq-PCR were used for detection of resistance coding genes. Results A variable susceptibility pattern was documented against different antibiotic classes. LAB strains irrespective of origin displayed marked phenotypic resistance against cephalosporins, aminoglycosides, quinolones, glycopeptides; and methicillin among beta-lactams with few exceptions. In contrast, high sensitivity was recorded against macrolides, sulphonamides and carbapenems sub-group of beta-lactams with some variations. parC, associated with ciprofloxacin resistance was detected in 76.5% of the strains. Other prevalent resistant determinants observed were aac(6?)Ii (42.1%), ermB, ermC (29.4%), and tetM (20.5%). Six (?17.6%) of the isolates were free from genetic resistance determinants screened in this study. Conclusion Study revealed presence of antibiotic resistance determinants among lactobacilli from both fermented foods and human sources.https://doi.org/10.1186/s12866-023-02883-0Antibiotic resistanceLactic acid bacteriaLactobacilliMulti drug resistantResistance genes
spellingShingle Rachael T. Duche
Anamika Singh
Arundhati Ganesh Wandhare
Vikas Sangwan
Manvesh Kumar Sihag
Tochukwu N. T. Nwagu
Harsh Panwar
Lewis. I. Ezeogu
Antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from Nigeria
BMC Microbiology
Antibiotic resistance
Lactic acid bacteria
Lactobacilli
Multi drug resistant
Resistance genes
title Antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from Nigeria
title_full Antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from Nigeria
title_fullStr Antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from Nigeria
title_full_unstemmed Antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from Nigeria
title_short Antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from Nigeria
title_sort antibiotic resistance in potential probiotic lactic acid bacteria of fermented foods and human origin from nigeria
topic Antibiotic resistance
Lactic acid bacteria
Lactobacilli
Multi drug resistant
Resistance genes
url https://doi.org/10.1186/s12866-023-02883-0
work_keys_str_mv AT rachaeltduche antibioticresistanceinpotentialprobioticlacticacidbacteriaoffermentedfoodsandhumanoriginfromnigeria
AT anamikasingh antibioticresistanceinpotentialprobioticlacticacidbacteriaoffermentedfoodsandhumanoriginfromnigeria
AT arundhatiganeshwandhare antibioticresistanceinpotentialprobioticlacticacidbacteriaoffermentedfoodsandhumanoriginfromnigeria
AT vikassangwan antibioticresistanceinpotentialprobioticlacticacidbacteriaoffermentedfoodsandhumanoriginfromnigeria
AT manveshkumarsihag antibioticresistanceinpotentialprobioticlacticacidbacteriaoffermentedfoodsandhumanoriginfromnigeria
AT tochukwuntnwagu antibioticresistanceinpotentialprobioticlacticacidbacteriaoffermentedfoodsandhumanoriginfromnigeria
AT harshpanwar antibioticresistanceinpotentialprobioticlacticacidbacteriaoffermentedfoodsandhumanoriginfromnigeria
AT lewisiezeogu antibioticresistanceinpotentialprobioticlacticacidbacteriaoffermentedfoodsandhumanoriginfromnigeria