Protocol to identify functional doppelgängers and verify biomedical gene expression data using doppelgangerIdentifier

Summary: Functional doppelgängers (FDs) are independently derived sample pairs that confound machine learning model (ML) performance when assorted across training and validation sets. Here, we detail the use of doppelgangerIdentifier (DI), providing software installation, data preparation, doppelgän...

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Bibliographic Details
Main Authors: Li Rong Wang, Xiuyi Fan, Wilson Wen Bin Goh
Format: Article
Language:English
Published: Elsevier 2022-12-01
Series:STAR Protocols
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166722006633