New insights into the relationship between the average nucleotide identity and the digital DNA–DNA hybridization values in the genus Amycolatopsis and Amycolatopsis cynarae sp. nov., a novel actinobacterium from the rhizosphere soil of Cynara scolymus, and proposal of Amycolatopsis niigatensis as a synonym of Amycolatopsis echigonensis based on comparative genomic analysis

New insights into the relationship between the average nucleotide identity and the digital DNA–DNA hybridization values in the genus Amycolatopsis and Amycolatopsis cynarae sp. nov., a novel actinobacterium from the rhizosphere soil of Cynara scolymus, and proposal of Amycolatopsis niigatensis as a synonym of Amycolatopsis echigonensis based on comparative genomic analysis

At present, it is widely believed that a 95–96% average nucleotide identity (ANI) value is equivalent to a 70% digital DNA–DNA hybridization (dDDH) value in the prokaryotic taxonomy. However, in the present study, comparative genome analysis of 29 pairs of Amycolatopsis type strains revealed that a...

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Bibliographic Details
Main Authors: Aihua Deng, Li Fu, Ping Mo, Yaxi Zheng, Ting Tang, Jian Gao
Format: Article
Language:English
Published: Frontiers Media S.A. 2024-04-01
Series:Frontiers in Microbiology
Subjects:
International Streptomyces Project
ANIm and dDDH
corresponding relationship
Amycolatopsis cynarae sp. nov.
synonym
Amycolatopsis niigatensis
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2024.1359021/full

Internet

https://www.frontiersin.org/articles/10.3389/fmicb.2024.1359021/full

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