Substantial batch effects in TCGA exome sequences undermine pan-cancer analysis of germline variants
Abstract Background In recent years, research on cancer predisposition germline variants has emerged as a prominent field. The identity of somatic mutations is based on a reliable mapping of the patient germline variants. In addition, the statistics of germline variants frequencies in healthy indivi...
Main Authors: | Roni Rasnic, Nadav Brandes, Or Zuk, Michal Linial |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2019-08-01
|
Series: | BMC Cancer |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s12885-019-5994-5 |
Similar Items
-
Common genetic variation in the germline influences where and how tumors develop
by: Hannah Carter, et al.
Published: (2017-05-01) -
Germline Variants Associated with Nasopharyngeal Carcinoma Predisposition Identified through Whole-Exome Sequencing
by: Ning-Yuan Lee, et al.
Published: (2022-07-01) -
Molecular Pathogenesis in Myeloid Neoplasms with Germline Predisposition
by: Juehua Gao, et al.
Published: (2021-12-01) -
Germline whole exome sequencing of a family with appendiceal mucinous tumours presenting with pseudomyxoma peritonei
by: Mei Sim Lung, et al.
Published: (2020-05-01) -
A knowledge-based framework for the discovery of cancer-predisposing variants using large-scale sequencing breast cancer data
by: Giorgio E. M. Melloni, et al.
Published: (2017-05-01)