Context-driven discovery of gene cassettes in mobile integrons using a computational grammar

<p>Abstract</p> <p>Background</p> <p>Gene discovery algorithms typically examine sequence data for low level patterns. A novel method to computationally discover higher order DNA structures is presented, using a context sensitive grammar. The algorithm was applied to th...

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Bibliographic Details
Main Authors: Schaeffer Jaron, Partridge Sally R, Coiera Enrico, Tsafnat Guy, Iredell Jon R
Format: Article
Language:English
Published: BMC 2009-09-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/10/281