Defining a metagenomic threshold for detecting low abundances of Providencia alcalifaciens in canine faecal samples

Defining a metagenomic threshold for detecting low abundances of Providencia alcalifaciens in canine faecal samples

IntroductionAcute haemorrhagic diarrhoea syndrome (AHDS) in dogs is a condition of unknown aetiology. Providencia alcalifaciens is suspected to play a role in the disease as it was commonly found in dogs suffering from AHDS during a Norwegian outbreak in 2019. The role of this bacterium as a constit...

Full description

Bibliographic Details
Main Authors: Anja Maria Aardal, Eiril Moen Soltvedt, Simen Foyn Nørstebø, Thomas H. A. Haverkamp, Sabrina Rodriguez-Campos, Ellen Skancke, Ann-Katrin Llarena
Format: Article
Language:English
Published: Frontiers Media S.A. 2024-02-01
Series:Frontiers in Cellular and Infection Microbiology
Subjects:
shotgun sequencing
faecal microbiota
AHDS
canine
detection limit
clinical metagenomics
Online Access:https://www.frontiersin.org/articles/10.3389/fcimb.2024.1305742/full

Internet

https://www.frontiersin.org/articles/10.3389/fcimb.2024.1305742/full

Similar Items