PIE-seq: identifying RNA-binding protein targets by dual RNA-deaminase editing and sequencing

Abstract RNA-binding proteins (RBPs) are essential for gene regulation, but it remains a challenge to identify their RNA targets across cell types. Here we present PIE-Seq to investigate Protein-RNA Interaction with dual-deaminase Editing and Sequencing by conjugating C-to-U and A-to-I base editors...

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Bibliographic Details
Main Authors: Xiangbin Ruan, Kaining Hu, Xiaochang Zhang
Format: Article
Language:English
Published: Nature Portfolio 2023-06-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-39054-8