Pairwise visual comparison of small RNA secondary structures with base pair probabilities

Abstract Background Predicted RNA secondary structures are typically visualized using dot-plots for base pair binding probabilities and planar graphs for unique structures, such as the minimum free energy structure. These are however difficult to analyze simultaneously. Results This work introduces...

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Bibliographic Details
Main Authors: Serge Léger, Maria Beatriz Walter Costa, Dan Tulpan
Format: Article
Language:English
Published: BMC 2019-05-01
Series:BMC Bioinformatics
Online Access:http://link.springer.com/article/10.1186/s12859-019-2902-6