Mutually Isomeric 2- and 4-(3-Nitro-1,2,4-triazol-1-yl)pyrimidines Inspired by an Antimycobacterial Screening Hit: Synthesis and Biological Activity against the ESKAPE Panel of Pathogens

Starting from the structure of antimycobacterial screening hit OTB-021 which was devoid of activity against ESKAPE pathogens, we designed, synthesized and tested two mutually isomeric series of novel simplified analogs, 2- and 4-(3-nitro-1,2,4-triazol-1-yl)pyrimidines, bearing various amino side cha...

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Main Authors: Sergey Chuprun, Dmitry Dar’in, Elizaveta Rogacheva, Liudmila Kraeva, Oleg Levin, Olga Manicheva, Marine Dogonadze, Tatiana Vinogradova, Olga Bakulina, Mikhail Krasavin
Format: Article
Language:English
Published: MDPI AG 2020-10-01
Series:Antibiotics
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Online Access:https://www.mdpi.com/2079-6382/9/10/666
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author Sergey Chuprun
Dmitry Dar’in
Elizaveta Rogacheva
Liudmila Kraeva
Oleg Levin
Olga Manicheva
Marine Dogonadze
Tatiana Vinogradova
Olga Bakulina
Mikhail Krasavin
author_facet Sergey Chuprun
Dmitry Dar’in
Elizaveta Rogacheva
Liudmila Kraeva
Oleg Levin
Olga Manicheva
Marine Dogonadze
Tatiana Vinogradova
Olga Bakulina
Mikhail Krasavin
author_sort Sergey Chuprun
collection DOAJ
description Starting from the structure of antimycobacterial screening hit OTB-021 which was devoid of activity against ESKAPE pathogens, we designed, synthesized and tested two mutually isomeric series of novel simplified analogs, 2- and 4-(3-nitro-1,2,4-triazol-1-yl)pyrimidines, bearing various amino side chains. These compounds demonstrated a reverse bioactivity profile being inactive against <i>M. tuberculosis</i> while inhibiting the growth of all ESKAPE pathogens (with variable potency patterns) except for Gram-negative <i>P. aeruginosa</i>. Reduction potentials (E<sub>1/2</sub>, V) measured for selected compounds by cyclic voltammetry were tightly grouped in the −1.3–−1.1 V range for a reversible single-electron reduction. No apparent correlation between the E<sub>1/2</sub> values and the ESKAPE minimum inhibitory concentrations was established, suggesting possible significance of other factors, besides the compounds’ reduction potential, which determine the observed antibacterial activity. Generally, more negative E<sub>1/2</sub> values were displayed by 2-(3-nitro-1,2,4-triazol-1-yl)pyrimidines, which is in line with the frequently observed activity loss on moving the 3-nitro-1,2,4-triazol-1-yl moiety from position 4 to position 2 of the pyrimidine nucleus.
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spelling doaj.art-9b4e8bcc2c3549e784e50624700c34362023-11-20T15:52:05ZengMDPI AGAntibiotics2079-63822020-10-0191066610.3390/antibiotics9100666Mutually Isomeric 2- and 4-(3-Nitro-1,2,4-triazol-1-yl)pyrimidines Inspired by an Antimycobacterial Screening Hit: Synthesis and Biological Activity against the ESKAPE Panel of PathogensSergey Chuprun0Dmitry Dar’in1Elizaveta Rogacheva2Liudmila Kraeva3Oleg Levin4Olga Manicheva5Marine Dogonadze6Tatiana Vinogradova7Olga Bakulina8Mikhail Krasavin9Institute of Chemistry, Saint Petersburg State University, 199034 Saint Petersburg, RussiaInstitute of Chemistry, Saint Petersburg State University, 199034 Saint Petersburg, RussiaPasteur Institute of Epidemiology and Microbiology, 14 Mira Street, 197101 Saint Petersburg, RussiaPasteur Institute of Epidemiology and Microbiology, 14 Mira Street, 197101 Saint Petersburg, RussiaInstitute of Chemistry, Saint Petersburg State University, 199034 Saint Petersburg, RussiaSaint Petersburg Research Institute of Phthisiopulmonology, 2-4 Ligovsky Prospekt, 191036 Saint Petersburg, RussiaSaint Petersburg Research Institute of Phthisiopulmonology, 2-4 Ligovsky Prospekt, 191036 Saint Petersburg, RussiaSaint Petersburg Research Institute of Phthisiopulmonology, 2-4 Ligovsky Prospekt, 191036 Saint Petersburg, RussiaInstitute of Chemistry, Saint Petersburg State University, 199034 Saint Petersburg, RussiaInstitute of Chemistry, Saint Petersburg State University, 199034 Saint Petersburg, RussiaStarting from the structure of antimycobacterial screening hit OTB-021 which was devoid of activity against ESKAPE pathogens, we designed, synthesized and tested two mutually isomeric series of novel simplified analogs, 2- and 4-(3-nitro-1,2,4-triazol-1-yl)pyrimidines, bearing various amino side chains. These compounds demonstrated a reverse bioactivity profile being inactive against <i>M. tuberculosis</i> while inhibiting the growth of all ESKAPE pathogens (with variable potency patterns) except for Gram-negative <i>P. aeruginosa</i>. Reduction potentials (E<sub>1/2</sub>, V) measured for selected compounds by cyclic voltammetry were tightly grouped in the −1.3–−1.1 V range for a reversible single-electron reduction. No apparent correlation between the E<sub>1/2</sub> values and the ESKAPE minimum inhibitory concentrations was established, suggesting possible significance of other factors, besides the compounds’ reduction potential, which determine the observed antibacterial activity. Generally, more negative E<sub>1/2</sub> values were displayed by 2-(3-nitro-1,2,4-triazol-1-yl)pyrimidines, which is in line with the frequently observed activity loss on moving the 3-nitro-1,2,4-triazol-1-yl moiety from position 4 to position 2 of the pyrimidine nucleus.https://www.mdpi.com/2079-6382/9/10/666bioreducible prodrugsnitroazoles3-nitro-1,2,4-triazolenucleophilic aromatic substitutionantimycobacterial activityESKAPE pathogens
spellingShingle Sergey Chuprun
Dmitry Dar’in
Elizaveta Rogacheva
Liudmila Kraeva
Oleg Levin
Olga Manicheva
Marine Dogonadze
Tatiana Vinogradova
Olga Bakulina
Mikhail Krasavin
Mutually Isomeric 2- and 4-(3-Nitro-1,2,4-triazol-1-yl)pyrimidines Inspired by an Antimycobacterial Screening Hit: Synthesis and Biological Activity against the ESKAPE Panel of Pathogens
Antibiotics
bioreducible prodrugs
nitroazoles
3-nitro-1,2,4-triazole
nucleophilic aromatic substitution
antimycobacterial activity
ESKAPE pathogens
title Mutually Isomeric 2- and 4-(3-Nitro-1,2,4-triazol-1-yl)pyrimidines Inspired by an Antimycobacterial Screening Hit: Synthesis and Biological Activity against the ESKAPE Panel of Pathogens
title_full Mutually Isomeric 2- and 4-(3-Nitro-1,2,4-triazol-1-yl)pyrimidines Inspired by an Antimycobacterial Screening Hit: Synthesis and Biological Activity against the ESKAPE Panel of Pathogens
title_fullStr Mutually Isomeric 2- and 4-(3-Nitro-1,2,4-triazol-1-yl)pyrimidines Inspired by an Antimycobacterial Screening Hit: Synthesis and Biological Activity against the ESKAPE Panel of Pathogens
title_full_unstemmed Mutually Isomeric 2- and 4-(3-Nitro-1,2,4-triazol-1-yl)pyrimidines Inspired by an Antimycobacterial Screening Hit: Synthesis and Biological Activity against the ESKAPE Panel of Pathogens
title_short Mutually Isomeric 2- and 4-(3-Nitro-1,2,4-triazol-1-yl)pyrimidines Inspired by an Antimycobacterial Screening Hit: Synthesis and Biological Activity against the ESKAPE Panel of Pathogens
title_sort mutually isomeric 2 and 4 3 nitro 1 2 4 triazol 1 yl pyrimidines inspired by an antimycobacterial screening hit synthesis and biological activity against the eskape panel of pathogens
topic bioreducible prodrugs
nitroazoles
3-nitro-1,2,4-triazole
nucleophilic aromatic substitution
antimycobacterial activity
ESKAPE pathogens
url https://www.mdpi.com/2079-6382/9/10/666
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