Fast and accurate estimation of the covariance between pairwise maximum likelihood distances

Pairwise evolutionary distances are a model-based summary statistic for a set of molecular sequences. They represent the leaf-to-leaf path lengths of the underlying phylogenetic tree. Estimates of pairwise distances with overlapping paths covary because of shared mutation events. It is desirable to...

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Bibliographic Details
Main Author: Manuel Gil
Format: Article
Language:English
Published: PeerJ Inc. 2014-09-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/583.pdf