An enzymatic activation of formaldehyde for nucleotide methylation

The bacterial thymidylate synthase ThyX catalyzes the reductive methylation of deoxyuridylate (dUMP) into deoxythymidylate (dTMP) and requires both folate and flavin for activity. Here, the authors combine biochemical experiments, spectroscopic measurements and flavin synthesis chemistry to show tha...

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Main Authors: Charles Bou-Nader, Frederick W. Stull, Ludovic Pecqueur, Philippe Simon, Vincent Guérineau, Antoine Royant, Marc Fontecave, Murielle Lombard, Bruce A. Palfey, Djemel Hamdane
Format: Article
Language:English
Published: Nature Portfolio 2021-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-021-24756-8
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author Charles Bou-Nader
Frederick W. Stull
Ludovic Pecqueur
Philippe Simon
Vincent Guérineau
Antoine Royant
Marc Fontecave
Murielle Lombard
Bruce A. Palfey
Djemel Hamdane
author_facet Charles Bou-Nader
Frederick W. Stull
Ludovic Pecqueur
Philippe Simon
Vincent Guérineau
Antoine Royant
Marc Fontecave
Murielle Lombard
Bruce A. Palfey
Djemel Hamdane
author_sort Charles Bou-Nader
collection DOAJ
description The bacterial thymidylate synthase ThyX catalyzes the reductive methylation of deoxyuridylate (dUMP) into deoxythymidylate (dTMP) and requires both folate and flavin for activity. Here, the authors combine biochemical experiments, spectroscopic measurements and flavin synthesis chemistry to show that formaldehyde (CH2O) can replace the natural methylene donor of ThyX in a CH2O-shunt reaction, yielding a carbinolamine intermediate with the reduced flavin coenzyme, and they present the crystal structure of this intermediate.
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spelling doaj.art-9d2804fa1f2e4892889a4447770406602022-12-21T19:25:34ZengNature PortfolioNature Communications2041-17232021-07-011211810.1038/s41467-021-24756-8An enzymatic activation of formaldehyde for nucleotide methylationCharles Bou-Nader0Frederick W. Stull1Ludovic Pecqueur2Philippe Simon3Vincent Guérineau4Antoine Royant5Marc Fontecave6Murielle Lombard7Bruce A. Palfey8Djemel Hamdane9Laboratoire de Chimie des Processus Biologiques, CNRS-UMR 8229, Collège De France, Université Pierre et Marie CuriePrograms in Chemical Biology and the Department of Biological Chemistry, University of Michigan Medical SchoolLaboratoire de Chimie des Processus Biologiques, CNRS-UMR 8229, Collège De France, Université Pierre et Marie CurieLaboratoire de Chimie des Processus Biologiques, CNRS-UMR 8229, Collège De France, Université Pierre et Marie CurieCNRS, Institut de Chimie des Substances Naturelles UPR 2301, Université Paris-SaclayCEA, CNRS, Institut de Biologie Structurale (IBS), Université Grenoble AlpesLaboratoire de Chimie des Processus Biologiques, CNRS-UMR 8229, Collège De France, Université Pierre et Marie CurieLaboratoire de Chimie des Processus Biologiques, CNRS-UMR 8229, Collège De France, Université Pierre et Marie CuriePrograms in Chemical Biology and the Department of Biological Chemistry, University of Michigan Medical SchoolLaboratoire de Chimie des Processus Biologiques, CNRS-UMR 8229, Collège De France, Université Pierre et Marie CurieThe bacterial thymidylate synthase ThyX catalyzes the reductive methylation of deoxyuridylate (dUMP) into deoxythymidylate (dTMP) and requires both folate and flavin for activity. Here, the authors combine biochemical experiments, spectroscopic measurements and flavin synthesis chemistry to show that formaldehyde (CH2O) can replace the natural methylene donor of ThyX in a CH2O-shunt reaction, yielding a carbinolamine intermediate with the reduced flavin coenzyme, and they present the crystal structure of this intermediate.https://doi.org/10.1038/s41467-021-24756-8
spellingShingle Charles Bou-Nader
Frederick W. Stull
Ludovic Pecqueur
Philippe Simon
Vincent Guérineau
Antoine Royant
Marc Fontecave
Murielle Lombard
Bruce A. Palfey
Djemel Hamdane
An enzymatic activation of formaldehyde for nucleotide methylation
Nature Communications
title An enzymatic activation of formaldehyde for nucleotide methylation
title_full An enzymatic activation of formaldehyde for nucleotide methylation
title_fullStr An enzymatic activation of formaldehyde for nucleotide methylation
title_full_unstemmed An enzymatic activation of formaldehyde for nucleotide methylation
title_short An enzymatic activation of formaldehyde for nucleotide methylation
title_sort enzymatic activation of formaldehyde for nucleotide methylation
url https://doi.org/10.1038/s41467-021-24756-8
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