Correcting modification-mediated errors in nanopore sequencing by nucleotide demodification and reference-based correction

Abstract The accuracy of Oxford Nanopore Technology (ONT) sequencing has significantly improved thanks to new flowcells, sequencing kits, and basecalling algorithms. However, novel modification types untrained in the basecalling models can seriously reduce the quality. Here we reports a set of ONT-s...

Full description

Bibliographic Details
Main Authors: Chien-Shun Chiou, Bo-Han Chen, You-Wun Wang, Nang-Ting Kuo, Chih-Hsiang Chang, Yao-Ting Huang
Format: Article
Language:English
Published: Nature Portfolio 2023-11-01
Series:Communications Biology
Online Access:https://doi.org/10.1038/s42003-023-05605-4