scQUEST: Quantifying tumor ecosystem heterogeneity from mass or flow cytometry data

Summary: With mass and flow cytometry, millions of single-cell profiles with dozens of parameters can be measured to comprehensively characterize complex tumor ecosystems. Here, we present scQUEST, an open-source Python library for cell type identification and quantification of tumor ecosystem heter...

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Bibliographic Details
Main Authors: Adriano Luca Martinelli, Johanna Wagner, Bernd Bodenmiller, Maria Anna Rapsomaniki
Format: Article
Language:English
Published: Elsevier 2022-09-01
Series:STAR Protocols
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166722004580