Struo2: efficient metagenome profiling database construction for ever-expanding microbial genome datasets

Mapping metagenome reads to reference databases is the standard approach for assessing microbial taxonomic and functional diversity from metagenomic data. However, public reference databases often lack recently generated genomic data such as metagenome-assembled genomes (MAGs), which can limit the s...

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Bibliographic Details
Main Authors: Nicholas D. Youngblut, Ruth E. Ley
Format: Article
Language:English
Published: PeerJ Inc. 2021-09-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/12198.pdf