Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery

We present Microseek, a pipeline for virus identification and discovery based on RVDB-prot, a comprehensive, curated and regularly updated database of viral proteins. Microseek analyzes metagenomic Next Generation Sequencing (mNGS) raw data by performing quality steps, de novo assembly, and by scori...

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Bibliographic Details
Main Authors: Philippe Pérot, Thomas Bigot, Sarah Temmam, Béatrice Regnault, Marc Eloit
Format: Article
Language:English
Published: MDPI AG 2022-09-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/14/9/1990