Studying miRNA–mRNA Interactions: An Optimized CLIP-Protocol for Endogenous Ago2-Protein

Transcriptome-wide analysis of RNA-binding partners is commonly achieved using UV crosslinking and immunoprecipitation (CLIP). Individual-nucleotide-resolution CLIP (iCLIP)enables identification of the specific position of the protein–RNA interaction. In addition to RNA-binding proteins (RBPs), micr...

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Bibliographic Details
Main Authors: Sophie Stebel, Janina Breuer, Oliver Rossbach
Format: Article
Language:English
Published: MDPI AG 2022-11-01
Series:Methods and Protocols
Subjects:
Online Access:https://www.mdpi.com/2409-9279/5/6/96