New alignment-based sequence extraction software (ALiBaSeq) and its utility for deep level phylogenetics

Despite many bioinformatic solutions for analyzing sequencing data, few options exist for targeted sequence retrieval from whole genomic sequencing (WGS) data with the ultimate goal of generating a phylogeny. Available tools especially struggle at deep phylogenetic levels and necessitate amino-acid...

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Bibliographic Details
Main Authors: Alexander Knyshov, Eric R.L. Gordon, Christiane Weirauch
Format: Article
Language:English
Published: PeerJ Inc. 2021-03-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/11019.pdf