Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE
Abstract Long-read single-cell RNA sequencing (scRNA-seq) enables the quantification of RNA isoforms in individual cells. However, long-read scRNA-seq using the Oxford Nanopore platform has largely relied upon matched short-read data to identify cell barcodes. We introduce BLAZE, which accurately an...
Main Authors: | Yupei You, Yair D. J. Prawer, Ricardo De Paoli-Iseppi, Cameron P. J. Hunt, Clare L. Parish, Heejung Shim, Michael B. Clark |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2023-04-01
|
Series: | Genome Biology |
Online Access: | https://doi.org/10.1186/s13059-023-02907-y |
Similar Items
-
The blazing world /
by: Hustvedt, Siri
Published: (2014) -
BlazeNeo: Blazing Fast Polyp Segmentation and Neoplasm Detection
by: Nguyen S. An, et al.
Published: (2022-01-01) -
Fast and accurate matching of cellular barcodes across short-reads and long-reads of single-cell RNA-seq experiments
by: Ghazal Ebrahimi, et al.
Published: (2022-07-01) -
Introduction to welding and blazing/
by: 412229 Milner, D. R., et al.
Published: (1968) -
Passion -- the blaze within /
by: 329861 Low, Guat Tin, et al.
Published: (2004)