Bioconductor workflow for microbiome data analysis: from raw reads to community analyses [version 1; referees: 2 approved]

High-throughput sequencing of PCR-amplified taxonomic markers (like the 16S rRNA gene) has enabled a new level of analysis of complex bacterial communities known as microbiomes. Many tools exist to quantify and compare abundance levels or microbial composition of communities in different conditions....

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Bibliographic Details
Main Authors: Ben J. Callahan, Kris Sankaran, Julia A. Fukuyama, Paul J. McMurdie, Susan P. Holmes
Format: Article
Language:English
Published: F1000 Research Ltd 2016-06-01
Series:F1000Research
Subjects:
Online Access:http://f1000research.com/articles/5-1492/v1