Freshwater monitoring by nanopore sequencing

Freshwater monitoring by nanopore sequencing

While traditional microbiological freshwater tests focus on the detection of specific bacterial indicator species, including pathogens, direct tracing of all aquatic DNA through metagenomics poses a profound alternative. Yet, in situ metagenomic water surveys face substantial challenges in cost and...

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Bibliographic Details
Main Authors: Lara Urban, Andre Holzer, J Jotautas Baronas, Michael B Hall, Philipp Braeuninger-Weimer, Michael J Scherm, Daniel J Kunz, Surangi N Perera, Daniel E Martin-Herranz, Edward T Tipper, Susannah J Salter, Maximilian R Stammnitz
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2021-01-01
Series:eLife
Subjects:
nanopore sequencing
environmental metagenomics
freshwater ecology
bacterial monitoring
portable dna analysis
computational biology
Online Access:https://elifesciences.org/articles/61504

Internet

https://elifesciences.org/articles/61504

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