Cleaning Genotype Data from Diversity Outbred Mice

Cleaning Genotype Data from Diversity Outbred Mice

Data cleaning is an important first step in most statistical analyses, including efforts to map the genetic loci that contribute to variation in quantitative traits. Here we illustrate approaches to quality control and cleaning of array-based genotyping data for multiparent populations (experimental...

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Bibliographic Details
Main Authors: Karl W. Broman, Daniel M. Gatti, Karen L. Svenson, Śaunak Sen, Gary A. Churchill
Format: Article
Language:English
Published: Oxford University Press 2019-05-01
Series:G3: Genes, Genomes, Genetics
Subjects:
data cleaning
QTL
quantitative trait loci
data diagnostics
Multiparent Advanced Generation Inter-Cross (MAGIC)
multiparental populations
MPP
Online Access:http://g3journal.org/lookup/doi/10.1534/g3.119.400165

Internet

http://g3journal.org/lookup/doi/10.1534/g3.119.400165

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