Greedy de novo motif discovery to construct motif repositories for bacterial proteomes

Abstract Background Bacterial surfaces are complex systems, constructed from membranes, peptidoglycan and, importantly, proteins. The proteins play crucial roles as critical regulators of how the bacterium interacts with and survive in its environment. A full catalog of the motifs in protein familie...

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Bibliographic Details
Main Authors: Hamed Khakzad, Johan Malmström, Lars Malmström
Format: Article
Language:English
Published: BMC 2019-04-01
Series:BMC Bioinformatics
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12859-019-2686-8