Nanopore duplex sequencing as an alternative to Illumina MiSeq sequencing for eDNA-based biomonitoring of coastal aquaculture impacts

Oxford Nanopore Technologies has recently launched a duplex sequencing strategy and announced an improved error rate which is in a similar order of magnitude as Illumina sequencing. We therefore conducted a pilot study to assess whether Nanopore duplex sequencing has potential to be used as a techno...

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Bibliographic Details
Main Authors: Thorsten Stoeck, Sven Nicolai Katzenmeier, Hans-Werner Breiner, Verena Rubel
Format: Article
Language:English
Published: Pensoft Publishers 2024-05-01
Series:Metabarcoding and Metagenomics
Online Access:https://mbmg.pensoft.net/article/121817/download/pdf/