GraphSNP: an interactive distance viewer for investigating outbreaks and transmission networks using a graph approach
Abstract Background Cluster and transmission analysis utilising pairwise SNP distance are increasingly used in genomic epidemiological studies. However, current methods are often challenging to install and use, and lack interactive functionalities for easy data exploration. Results GraphSNP is an in...
Main Authors: | Budi Permana, Scott A. Beatson, Brian M. Forde |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2023-05-01
|
Series: | BMC Bioinformatics |
Subjects: | |
Online Access: | https://doi.org/10.1186/s12859-023-05332-x |
Similar Items
-
Transmission-reciprocal transmission index and coindex of graphs
by: Ramane Harishchandra S., et al.
Published: (2022-08-01) -
On the spread of the distance signless Laplacian matrix of a graph
by: Pirzada S., et al.
Published: (2023-08-01) -
Degree resistance distance of unicyclic graphs
by: Ivan Gutman, et al.
Published: (2012-06-01) -
Average distance colouring of graphs
by: Pandey Priyanka, et al.
Published: (2023-12-01) -
The Eccentric-Distance Sum Polynomials of Graphs by Using Graph Products
by: Alaa Altassan, et al.
Published: (2022-08-01)