Sensitive detection of circular DNAs at single-nucleotide resolution using guided realignment of partially aligned reads

Abstract Background Circular DNA has recently been identified across different species including human normal and cancerous tissue, but short-read mappers are unable to align many of the reads crossing circle junctions hence limiting their detection from short-read sequencing data. Results Here, we...

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Bibliographic Details
Main Authors: Iñigo Prada-Luengo, Anders Krogh, Lasse Maretty, Birgitte Regenberg
Format: Article
Language:English
Published: BMC 2019-12-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-019-3160-3