Clasnip: a web-based intraspecies classifier and multi-locus sequence typing for pathogenic microorganisms using fragmented sequences

Bioinformatic approaches for the identification of microorganisms have evolved rapidly, but existing methods are time-consuming, complicated or expensive for massive screening of pathogens and their non-pathogenic relatives. Also, bioinformatic classifiers usually lack automatically generated perfor...

Full description

Bibliographic Details
Main Authors: Jiacheng Chuan, Huimin Xu, Desmond L. Hammill, Lawrence Hale, Wen Chen, Xiang Li
Format: Article
Language:English
Published: PeerJ Inc. 2023-01-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/14490.pdf