Fine-grained parallel RNAalifold algorithm for RNA secondary structure prediction on FPGA

<p>Abstract</p> <p>Background</p> <p>In the field of RNA secondary structure prediction, the RNAalifold algorithm is one of the most popular methods using free energy minimization. However, general-purpose computers including parallel computers or multi-core computers e...

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Bibliographic Details
Main Authors: Xu Jiaqing, Yang Xuejun, Zhou Xingming, Dou Yong, Xia Fei, Zhang Yang
Format: Article
Language:English
Published: BMC 2009-01-01
Series:BMC Bioinformatics