Robust Phylodynamic Analysis of Genetic Sequencing Data from Structured Populations

Robust Phylodynamic Analysis of Genetic Sequencing Data from Structured Populations

The multi-type birth–death model with sampling is a phylodynamic model which enables the quantification of past population dynamics in structured populations based on phylogenetic trees. The BEAST 2 package <i>bdmm</i> implements an algorithm for numerically computing the probability den...

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Bibliographic Details
Main Authors: Jérémie Scire, Joëlle Barido-Sottani, Denise Kühnert, Timothy G. Vaughan, Tanja Stadler
Format: Article
Language:English
Published: MDPI AG 2022-07-01
Series:Viruses
Subjects:
phylogenetics
Bayesian inference
phylodynamics
population structure
Online Access:https://www.mdpi.com/1999-4915/14/8/1648

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https://www.mdpi.com/1999-4915/14/8/1648

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