BioNetGMMFit: estimating parameters of a BioNetGen model from time-stamped snapshots of single cells

Abstract Mechanistic models are commonly employed to describe signaling and gene regulatory kinetics in single cells and cell populations. Recent advances in single-cell technologies have produced multidimensional datasets where snapshots of copy numbers (or abundances) of a large number of proteins...

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Bibliographic Details
Main Authors: John Wu, William C. L. Stewart, Ciriyam Jayaprakash, Jayajit Das
Format: Article
Language:English
Published: Nature Portfolio 2023-09-01
Series:npj Systems Biology and Applications
Online Access:https://doi.org/10.1038/s41540-023-00299-0